Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904930.1_cds_XP_016455030.1_48998
CDS Infomation

[gene=LOC107779176] [db_xref=GeneID:107779176] [protein=AUGMIN subunit 5-like] [protein_id=XP_016455030.1] [location=join(31136..31629,32353..32892,33678..33819,34187..34363,34757..34966,36051..36254)] [gbkey=CDS]
Sequence

ATGGCAGGGTCCGTACAACCAGAAGCTATACTGGAATGGCTTCAGAAGGAGATGGGGTAC
CAACCTTTAGGTTCATACGCAGCTTCAAGCAAAGCAGCAATGCCCACCATCGATTCGCTT
CGCAAGATTTGCCGTGGGAACATGTTACCGATTTGGAATTTCCTCTTGAACAGAGTGAAA
TCCGAGAAAACTGTTGAAAAAATCCGCCGCAATATCCTTGTGCACGGAAAAGATGATGAA
AATGTTAATGCTGTTGATTCAGGGAGGAGTAAAGGGAAGAAGAAGGAGAAGGTAGGGGGA
GTGGGTAGGGACAATGGTTTGGGTGAGAATAGTAGGGAATTTGCATTGCAGGAGAGAGAC
TTGGCGGAGAAAGAGGTGGAAAGGCTAAGGCAGATAGTGAGGCGTCAGAGGAAAGAGTTG
AAGGCAAGGATGTTGGAGGTCTCGAGGGAGGAGGCTGAGCGTAAGCGCATGCTTGACGAG
AGGTCTAACTATAGACATAAACAAGTAATGCTGGAGGCTTATGACCAACAGTGTGATGAA
GCTGCAAAAATATTTTCGGAGTACCATAAACGTCTAAGTTATTATGTTAGCCAAGCAAGG
AATGTTAAGCGGTCTAGTGTTGATTCTTCTGCGGAGGTGATTACTACTTTTCATGCAAAT
GAGAAAGAATCTGTTTATTCAACTTTTAAAGGAGCCAAAAGTGCAGAGGATGTCATTCTC
ATTGAAACAACATGGGAAAGAAATATCAGGAAGGCATGCGAGTCTCTTGCTATGCAGATG
GCTGAAAAGATTCACAACTCTTTTCCTGCTTATGAAGGAAGTGGAATCCATATGAATTCT
CTGTTACAAGCTGCCAAGTTAGGTATTGACCTTGATGGTGATTTGCCCGATGAAGTAAGA
GATGCAATTGTAAGTTGCCTGAAAAGTCCTCCTCAGTTGCTACAGGCAATCACTGCATAT
GCTCAAAATCTGAAGACTTCGATTACTCGAGAAATAGAGAAAGTTGATGTTAGAGCTGAT
GCAGAGATTCTAAGGTACAAGTACGAGAATGACAGAGTAATGGATGCTTCTTCTCCTGAT
GTAACGTCACCTTTACAGTATCAGCTTTATGGAAATGGCAAAATTGGAGGTGATGCGTCT
TCAAGAGGGACTCAAAATCAACTTCTTGAGAGACAGAAAGCACATGTTCAGCAATTCATG
GCTACCGAAGATGCATTGAATAAAGCCGCAGAAGCAAGAAATATGAGTCAACAGCTTTTA
AAGCGCCTGCAAGGAACTGGTGATGCAATCTCTTCACACTCACTAGTAATTGGTGGAACA
TCAAAGAGTATGAGCAGCCTCAGACAACTTGAGCTGGAGGTCTGGACAAAGGAAAGAGAA
GCAGCTGGATTAAGAGCTAGCGTGAACACTCTAATGTCTGAAATACAACGTTTAAATACA
TTGTGCGCGGAGAGAAAAGAAGCTGAAGATTCTTTGAGAAAGAAATGGAAGAAGATCGAA
GAATTTGATGCTCGGCGATCAGAGCTTGAATCTATTTATAGTGCCCTACTGAAGGCAAGC
ATGGATGCTGCAGCATTTTGGAGTCAGCAGCCATCAGCTGCAAGGGATTATTCATCAAGT
TCTATAATTCCTGCTTGCACTGTGCTCGTAGATTTATCAAACTGTGCAAAAGATCTTATT
GAGCAAGAGGTTTCAGCATTTTATCAAACTCCTGATAATACACTTTACATGCTTCCATCA
ACACCTCAGGTTTGTAGATTTCACTAA

Peptide Sequence

PEP ID

XP_016455030.1
PEP Infomation

PREDICTED: AUGMIN subunit 5-like [Nicotiana tabacum]
Sequence

MAGSVQPEAILEWLQKEMGYQPLGSYAASSKAAMPTIDSLRKICRGNMLPIWNFLLNRVK
SEKTVEKIRRNILVHGKDDENVNAVDSGRSKGKKKEKVGGVGRDNGLGENSREFALQERD
LAEKEVERLRQIVRRQRKELKARMLEVSREEAERKRMLDERSNYRHKQVMLEAYDQQCDE
AAKIFSEYHKRLSYYVSQARNVKRSSVDSSAEVITTFHANEKESVYSTFKGAKSAEDVIL
IETTWERNIRKACESLAMQMAEKIHNSFPAYEGSGIHMNSLLQAAKLGIDLDGDLPDEVR
DAIVSCLKSPPQLLQAITAYAQNLKTSITREIEKVDVRADAEILRYKYENDRVMDASSPD
VTSPLQYQLYGNGKIGGDASSRGTQNQLLERQKAHVQQFMATEDALNKAAEARNMSQQLL
KRLQGTGDAISSHSLVIGGTSKSMSSLRQLELEVWTKEREAAGLRASVNTLMSEIQRLNT
LCAERKEAEDSLRKKWKKIEEFDARRSELESIYSALLKASMDAAAFWSQQPSAARDYSSS
SIIPACTVLVDLSNCAKDLIEQEVSAFYQTPDNTLYMLPSTPQVCRFH

Transcript Sequence

Gene sequence data has not been registered.